VISTAL - A new 2D visualization tool of protein 3D structural alignments

Rachel Kolodny; Barry Honig

doi:10.1093/bioinformatics/btl353

VISTAL - A new 2D visualization tool of protein 3D structural alignments

Research output: Contribution to journal › Article › peer-review

Abstract

Summary: We offer a tool, denoted VISTAL, for two-dimensional visualization of protein structural alignments. VISTAL describes aligned structures as a series of matched secondary structure elements, colored according to the three-dimensional distance of their Cα atoms.

Original language	English
Pages (from-to)	2166-2167
Number of pages	2
Journal	Bioinformatics
Volume	22
Issue number	17
DOIs	https://doi.org/10.1093/bioinformatics/btl353
State	Published - 1 Sep 2006
Externally published	Yes

Bibliographical note

Funding Information:
The authors are grateful to Mickey Kosloff for many helpful comments. The development of VISTAL was supported in part by NIH grants GM30518 and GM074958.

ASJC Scopus subject areas

Statistics and Probability
Biochemistry
Molecular Biology
Computer Science Applications
Computational Theory and Mathematics
Computational Mathematics

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10.1093/bioinformatics/btl353

Cite this

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title = "VISTAL - A new 2D visualization tool of protein 3D structural alignments",

abstract = "Summary: We offer a tool, denoted VISTAL, for two-dimensional visualization of protein structural alignments. VISTAL describes aligned structures as a series of matched secondary structure elements, colored according to the three-dimensional distance of their Cα atoms.",

author = "Rachel Kolodny and Barry Honig",

note = "Funding Information: The authors are grateful to Mickey Kosloff for many helpful comments. The development of VISTAL was supported in part by NIH grants GM30518 and GM074958.",

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doi = "10.1093/bioinformatics/btl353",

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AU - Kolodny, Rachel

AU - Honig, Barry

N1 - Funding Information: The authors are grateful to Mickey Kosloff for many helpful comments. The development of VISTAL was supported in part by NIH grants GM30518 and GM074958.

PY - 2006/9/1

Y1 - 2006/9/1

N2 - Summary: We offer a tool, denoted VISTAL, for two-dimensional visualization of protein structural alignments. VISTAL describes aligned structures as a series of matched secondary structure elements, colored according to the three-dimensional distance of their Cα atoms.

AB - Summary: We offer a tool, denoted VISTAL, for two-dimensional visualization of protein structural alignments. VISTAL describes aligned structures as a series of matched secondary structure elements, colored according to the three-dimensional distance of their Cα atoms.

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EP - 2167

JO - Bioinformatics

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VISTAL - A new 2D visualization tool of protein 3D structural alignments

Abstract

Bibliographical note

ASJC Scopus subject areas

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