Sequence-related amplified polymorphism (SRAP) of wild emmer wheat (Triticum dicoccoides) in Israel and its ecological association

Pan Dong; Yu Ming Wei; Guo Yue Chen; Wei Li; Ji Rui Wang; Eviatar Nevo; You Liang Zheng

doi:10.1016/j.bse.2009.12.015

Sequence-related amplified polymorphism (SRAP) of wild emmer wheat (Triticum dicoccoides) in Israel and its ecological association

Pan Dong, Yu Ming Wei, Guo Yue Chen, Wei Li, Ji Rui Wang, Eviatar Nevo, You Liang Zheng

Department of Evolutionary and Environmental Biology

Research output: Contribution to journal › Article › peer-review

Abstract

Genetic diversity and population structure of 15 wild emmer wheat (Triticum dicoccoides) populations from Israel were detected by 30 sequence-related amplified polymorphism (SRAP) primer pairs. Two hundred and forty four fragments out of 438 were polymorphic. The proportion of polymorphic loci (P), the genetic diversity (He), and Shannon's information index were 0.557, 0.198, and 0.295, respectively. The population Amirim had the highest genetic variation, whereas the population of Tabigha had the lowest genetic variation. The hierarchical analysis of molecular variance (AMOVA) revealed that most of the variation was presented within populations. The value of genetic distance (D) between the populations varied from 0.027 to 0.165 with an average of 0.079, and the estimates of genetic distance were geographically independent based on the Mantel test (r = 0.105, P = 0.168). A total of 30 significant (P < 0.05) correlations were detected between 14 SRAP loci and 12 ecogeographic factors. Crown

Original language	English
Pages (from-to)	1-11
Number of pages	11
Journal	Biochemical Systematics and Ecology
Volume	38
Issue number	1
DOIs	https://doi.org/10.1016/j.bse.2009.12.015
State	Published - Feb 2010

Bibliographical note

Funding Information:
This work was supported by the National High Technology Research and Development Program of China (863 program 2006AA10Z179 and 2006AA10Z1F8 ). E. Nevo acknowledges the support of the Discount Bank Chair of Evolutionary Biology and the Ancell-Teicher Research Foundation of Molecular Genetics and Evolution.

Keywords

Genetic diversity
Israel ecological relationship
Population structure
SRAP
Wild emmer wheat

ASJC Scopus subject areas

Ecology, Evolution, Behavior and Systematics
Biochemistry

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

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10.1016/j.bse.2009.12.015

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title = "Sequence-related amplified polymorphism (SRAP) of wild emmer wheat (Triticum dicoccoides) in Israel and its ecological association",

abstract = "Genetic diversity and population structure of 15 wild emmer wheat (Triticum dicoccoides) populations from Israel were detected by 30 sequence-related amplified polymorphism (SRAP) primer pairs. Two hundred and forty four fragments out of 438 were polymorphic. The proportion of polymorphic loci (P), the genetic diversity (He), and Shannon's information index were 0.557, 0.198, and 0.295, respectively. The population Amirim had the highest genetic variation, whereas the population of Tabigha had the lowest genetic variation. The hierarchical analysis of molecular variance (AMOVA) revealed that most of the variation was presented within populations. The value of genetic distance (D) between the populations varied from 0.027 to 0.165 with an average of 0.079, and the estimates of genetic distance were geographically independent based on the Mantel test (r = 0.105, P = 0.168). A total of 30 significant (P < 0.05) correlations were detected between 14 SRAP loci and 12 ecogeographic factors. Crown",

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author = "Pan Dong and Wei, {Yu Ming} and Chen, {Guo Yue} and Wei Li and Wang, {Ji Rui} and Eviatar Nevo and Zheng, {You Liang}",

note = "Funding Information: This work was supported by the National High Technology Research and Development Program of China (863 program 2006AA10Z179 and 2006AA10Z1F8 ). E. Nevo acknowledges the support of the Discount Bank Chair of Evolutionary Biology and the Ancell-Teicher Research Foundation of Molecular Genetics and Evolution.",

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AU - Wang, Ji Rui

AU - Nevo, Eviatar

AU - Zheng, You Liang

N1 - Funding Information: This work was supported by the National High Technology Research and Development Program of China (863 program 2006AA10Z179 and 2006AA10Z1F8 ). E. Nevo acknowledges the support of the Discount Bank Chair of Evolutionary Biology and the Ancell-Teicher Research Foundation of Molecular Genetics and Evolution.

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N2 - Genetic diversity and population structure of 15 wild emmer wheat (Triticum dicoccoides) populations from Israel were detected by 30 sequence-related amplified polymorphism (SRAP) primer pairs. Two hundred and forty four fragments out of 438 were polymorphic. The proportion of polymorphic loci (P), the genetic diversity (He), and Shannon's information index were 0.557, 0.198, and 0.295, respectively. The population Amirim had the highest genetic variation, whereas the population of Tabigha had the lowest genetic variation. The hierarchical analysis of molecular variance (AMOVA) revealed that most of the variation was presented within populations. The value of genetic distance (D) between the populations varied from 0.027 to 0.165 with an average of 0.079, and the estimates of genetic distance were geographically independent based on the Mantel test (r = 0.105, P = 0.168). A total of 30 significant (P < 0.05) correlations were detected between 14 SRAP loci and 12 ecogeographic factors. Crown

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Sequence-related amplified polymorphism (SRAP) of wild emmer wheat (Triticum dicoccoides) in Israel and its ecological association

Abstract

Bibliographical note

Keywords

ASJC Scopus subject areas

UN SDGs

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