Abstract
Bacterial growth follows simple laws in constant conditions. However, bacteria in nature often face fluctuating environments. We therefore ask whether there are growth laws that apply to changing environments. We derive a law for upshifts using an optimal resource-allocation model: the post-shift growth rate equals the geometrical mean of the pre-shift growth rate and the growth rate on saturating carbon. We test this using chemostat and batch culture experiments, as well as previous data from several species. The increase in growth rate after an upshift indicates that ribosomes have spare capacity (SC). We demonstrate theoretically that SC has the cost of slow steady-state growth but is beneficial after an upshift because it prevents large overshoots in intracellular metabolites and allows rapid response to change. We also provide predictions for downshifts. The present study quantifies the optimal degree of SC, which rises the slower the growth rate, and suggests that SC can be precisely regulated. Bacterial growth depends on numerous reactions and yet in constant conditions follows surprisingly simple laws. Korem Kohanim et al. combine theory and experiment to find patterns in bacterial growth also for changing environments. These emerging patterns imply that bacteria save unused ribosomal capacity to better respond to change.
Original language | English |
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Pages (from-to) | 2891-2900 |
Number of pages | 10 |
Journal | Cell Reports |
Volume | 23 |
Issue number | 10 |
DOIs | |
State | Published - 5 Jun 2018 |
Externally published | Yes |
Bibliographical note
Publisher Copyright:© 2018 The Author(s)
Keywords
- bacterial growth laws
- biological physics
- cellular regulation
- non-equilibrium
- nutritional shifts
- optimality
- quantitative evolutionary design
- resource allocation
- safety factors
- systems biology
ASJC Scopus subject areas
- General Biochemistry, Genetics and Molecular Biology